Isolation of Wheat Microsatellite Dna Fragments by Hybridization Selection

نویسندگان

  • Erdogan Hakki
  • Christo Peev
  • Luchezar Karagyozov
  • Mahinur Akkaya
چکیده

A procedure for selection of wheat genomic fragments containing various microsatellites is described. The procedure is based on the hybridization of single-stranded DNA fragments either to filter bound microsatellite DNA or to biotinylated oligonucleotides in solution. Hybridized strands are isolated, amplified and cloned. Results presented show that enrichment for (CA)n/(TG)n microsatellites depends on hybridization conditions and on amplification protocol. Enrichment can be significantly improved by performing several hybridization selection rounds. The sequences of two wheat microsatellite clones are presented. The method is simple, saves time and may be used for microsatellite fragment isolation from plant DNA for genetic, evolutionary or population studies.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Hybrids in fishes and their identification using microsatellite DNA markers: A review

Among vertebrates, most of the fishes are unique for the lack of acrosome in their spermatozoa. The sperm enters the egg through micropyle of the egg. This has facilitated heterologous fertilization in many fishes and led to hybridization and polyploidization. Hybridization is performed both in the nature and domesticated fishes. Today, some of the hybrids have high growth rate than their paren...

متن کامل

Polyploidization as a Retraction Force in Plant Genome Evolution: Sequence Rearrangements in Triticale

BACKGROUND Polyploidization is a major evolutionary process in plants where hybridization and chromosome doubling induce enormous genomic stress and can generate genetic and epigenetic modifications. However, proper evaluation of DNA sequence restructuring events and the precise characterization of sequences involved are still sparse. METHODOLOGY/PRINCIPAL FINDINGS Inter Retrotransposons Ampl...

متن کامل

Microchimerism in twins

INTRODUCTION The aim of this paper was to report the occurrence of peripheral blood chimerism in newborns from bigeminal pregnancies. MATERIAL AND METHODS Cord blood collected from 50 pairs of twins constituted the biological material studied. Analyses included: DNA isolation, quantitative and qualitative assessment of DNA preparations, hybridization analysis of SLS type as well as of MLS typ...

متن کامل

Microsatellites obtained using strand extension: an enrichment protocol.

A new method is described to enrich genomic libraries for clones containing microsatellite repeats. The method involves selection on completed M13 genomic libraries rather than on genomic DNA before library construction. It uses two reactions, in which microsatellite oligonucleotides prime strand extension. The first reaction uses a biotinylated primer allowing vectors with microsatellite-conta...

متن کامل

Identification of microsatellite DNA markers for the giant anteater Myrmecophaga tridactyla.

The giant anteater (Myrmecophaga tridactyla) is found from Belize and Guatemala to Paraguay and Argentina. Its conservation status is considered vulnerable by IUCN. Here we report the isolation and characterization of six microsatellite loci. Positive loci for (GT)(n) were isolated using a magnetic bead hybridization selection protocol. The number of alleles per locus as well as the heterozygos...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2002